複雑生命システム動態研究教育拠点

原著論文・解説・総説

T. Tonooka, K. Sato, T. Osaki, R. Kawano and S. Takeuchi (2014)
Lipid bilayers on a picoliter microdroplet array for rapid fluorescence detection of membrane transport, Small, accepted
T. Teshima, H. Onoe, H. Aonuma, K. Kuribayashi-Shigetomi, K. Kamiya, T. Tonooka, H. Kanuka and S. Takeuchi (2014)
Magnetically Responsive Microflaps Reveal Cell Membrane Boundaries from Multiple Angles, Adv. Mater., online
T. Teshima, H. Onoe, K. Kuribayashi-Shigetomi, H. Aonuma, K. Kamiya, H. Ishihara, H. Kanuka and S. Takeuchi (2014)
Parylene mobile microplates integrated with an enzymatic release and handling of single adherent cells, Small, 10, 912-921
M. Ito, K. Kugou, J.A. Fawcett, S. Mura, S. Ikeda, H. Innan, and K. Ohta K. (2014)
Meiotic recombination cold spots in chromosomal cohesion sites, Genes to Cells, doi: 10.1111/gtc.12138.
H. Kono, M. Tamura, N. Osada, H. Suzuki, K. Abe, K. Moriwaki, K. Ohta, and T. Shiroishi (2014)
Prdm9 polymorphism unveils mouse evolutionary tracks, DNA Research, 10.1093/dnares/dst059
T. Yamada, K. Ohta K. (2013)
Initiation of meiotic recombination in chromatin structure, J Biochem. 154:107-114
T. Miyoshi, M. Ito, K. Ohta (2013)
Spatiotemporal regulation of meiotic recombination by Liaisonin, Bioarchitecture 3: 20-24
太田邦史(2013)
「エピゲノムと生命」講談社ブルーバックス
黒澤恒平、橋本講司、瀬尾秀宗、太田邦史(2013)
ADLibシステムによる抗体の進化分子工学、「進化工学の最前線」エヌ・ティー・エス出版p147-159.
竹俣直道、三木敦子、太田邦史(2013)
長鎖ノンコーディングRNAによる遺伝子発現・クロマチン修飾制御、実験医学31: 219-224
入江直樹(2014)
胚発生のロバストネスは進化にバイアスをかけているか?細胞工学, 1月号 Vol.33 No.1 p.84-88.
T. Sagawa (2014)
Thermodynamic and Logical Reversibilities Revisited, J. Stat. Mech. P03025
T. Sagawa and M. Ueda (2013)
Role of mutual information in entropy production under information exchanges, New. J. Phys. 15, 125012
S. Ito and T. Sagawa (2013)
Information Thermodynamics on Causal Networks, Phys. Rev. Lett. 111, 180603
Hidetoshi Aoki and Kunihiko Kaneko (2013)
Slow Stochastic Switching by Collective Chaos of Fast Elements, Phys.Rev.Lett., 111, 144102
Y. Goto and K. Kaneko (2013)
Minimal Model for Stem-Cell Differentiation, Phys.Rev.E. 88. 032718
Yohei Kondo, Kunihiko Kaneko, and Shuji Ishihara (2013)
Identifying dynamical systems with bifurcations from noisy partial observation, Phys. Rev. E., Phys. Rev. E 87, 042716
Nen Saito, Shuji Ishihara, and Kunihiko Kaneko (2013)
The Baldwin effect under multi-peaked fitness landscapes: Phenotypic fluctuation accelerates evolutionary rate, Phys. Rev. E 87, 052701
Chikara Furusawa and Kunihiko Kaneko (2013)
Epigenetic feedback regulation accelerates adaptation and evolution, PLoS One, 8, e61251
B. Pfeuty and K. Kaneko (2014)
Reliable binary decisions based on oscillations, Physical Review E, 89. 022707
F. Kawano, H. Suzuki, Y. Aono and M. Sato(2014)
Fluorescence Imaging-Based High-Throughput Screening of Fast- and Slow-Cycling LOV proteins, PLoS ONE, 8(12), e82693 (2013).
Y. Nihongaki, H. Suzuki, F. Kawano and M. Sato(2014)
Genetically Engineered Photoinducible Homodimerization System with Improved Dimer-Forming Efficiency, ACS Chem. Biol., 9, 617-621
Y. Sakai and K. Hukushima(2013)
Dynamics of One-Dimensional Ising Model without Detailed Balance Condition, J. Phys. Soc. Jpn., 82, 064003-1-8
S.Takabe and K. Hukushima(2014)
Typical Behavior of the Linear Programming Method for Combinatorial Optimization Problems: A Statistical?Mechanical Perspective, J. Phys. Soc. Jpn., 83, 043801-1-4
Shirokawa, Y. and Shimada, M. (2013)
Sex allocation pattern of the diatom Cyclotella meneghiniana. Proc. R. Soc. Biol. Sci. 280, 20130503
Sasakawa, K., Uchijima, K., Shibao, H. and Shimada, M.(2013)
Different patterns of oviposition learning in two closely related ectoparasitoid wasps with contrasting reproductive strategies. Naturwissenschaften, 100, 117-124
K. Fujimoto and S. Sawai (2013)
A Design Principle of Group-level Decision Making in Cell Populations, PLoS Comput Biol, 9, 6, e1003110, doi:10.1371/journal.pcbi.1003110
K. Fujimoto and S. Sawai (2013)
Collective decision-making and oscillatory behaviors in cell populations, Engineering of Chemical Complexity, 279-297, doi: 10.1142/9789814390460_0014
澤井哲、石原秀至、中島昭彦 (2013)
興奮系の自己組織化現象からみる細胞動態 実験医学, 31, 8, 1217-1223
I. Santi, N. Dhar, D. Bousbaine, Y. Wakamoto and J. D. McKinney (2013)
Single-cell dynamics of the chromosome replication and cell division cycles in mycobacteria Nature Communications 4: 2470, doi:10.1038/ncomms3470
D. Taniguchi‡, S. Ishihara‡, T. Oonuki, M. Honda-Kitahara, K. Kaneko and S. Sawai (2013)
Phase geometries of two-dimensional excitable waves govern self-organized morphodynamics of amoeboid cells. Proc. Natl. Acad. Sci. USA. 110(13), 5016-5021. (‡ Equal contribution)
K. J. McQuade, A. Nakajima, A. N. Ilacqua1, N. Shimada and S. Sawai. (2013)
The green tea catechin epigallocatechin gallate (EGCG) blocks cell motility, chemotaxis and development in Dictyostelium discoideum. PLoS ONE 8(3): e59275.
N. Masaki‡, K. Fujimoto‡, M. Honda-Kitahara, E. Hada and S. Sawai (2013)
Robustness of Self-Organizing Chemoattractant Field Arising from Precise Pulse Induction of Its Breakdown Enzyme: A Single-Cell Level Analysis of PDE Expression in Dictyostelium. Biophys. J. 104, 1191–1202. (‡ Equal contribution)
M. Inoue and K. Kaneko (2013)
Cooperative Adaptive Response in Gene Regulatory Networks with Many Degrees of Freedom, PLoS Computational Biolog, 9: e1003001
Yamada S, Ohta K, Yamada T*.
Acetylated Histone H3K9 is associated with meiotic recombination hotspots, and plays a role in recombination redundantly with other factors including the H3K4 methylase Set1 in fission yeast. Nucleic Acids Res. (2013) doi: 10.1093/nar/gkt049 (selected as a NAR top 5% "Featured Article")>
Galipon J., Miki A., Oda A., Inada T., and Ohta K*
Stress-induced lncRNAs evade nuclear degradation and enter the translational machinery, Genes to Cells (2013) in press
Y. Natsume and T. Toyota (2013)
Giant Vesicles Containing Microspheres with High Volume Fraction Prepared by Water-in-Oil Emulsion Centrifugation, Chem. Lett. 42, 295-297.
小林徹也、上村淳(2013)
確率的細胞システムにおけるベイズ情報処理 生物物理学会, 53, 2, 86-89.
小林徹也、上村淳(2013)
細胞のふるまいを読み解く時系列に潜む情報量 実験医学, 31, 8, 1239-1244.
小林徹也(2013)
定量データが切り開く生命科学 実験医学, 31, 8, 1202-1208

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